SNPstats

This is a web application to perform statistical analysis of genetic epidemiology studies using SNPs. You will find it in http://bioinfo.iconcologia.net/SNPstats

Some features include:
- Upload of simple formatted SNP data and covariates
- Easy selection of response, SNPs and covariates for each analysis
- Binary or quantitative response
- Analysis of single SNP: HWE, descriptive, association with response and interactions
- Analysis of multiple SNPs: LD, haplotype frequencies, association with response and interactions
- Nice HTML output